I'm a postdoctoral researcher at the Epigenomics Core, developing computational methods for supporting epigenomics analysis of chromatin profiling data. I create reproducible analysis pipelines for data from ChIP-exo, ATAC-seq, nuclease protection sequencing assays that integrate into our detailed metadata tracking infrastructure. Beyond pipeline development, I work directly with experimental biologists to troubleshoot protocol development, develop customized analysis methods, and interpret complex datasets. This site serves both as an introduction to my work and an aggregation of links to resources and technical insights that I've accumulated—both to help collaborators navigate common challenges and to contribute to the broader effort of making genomics more reproducible and accessible.
Software
Research Experience
Epigenomics
ChIP-exo, ATAC-seq, and other kinds of accessibility profiling analysis
Pipelines
Architecting reproducible and scalable pipelines for standardized genomics data processing
Regulatory Genomics
Transcription factor binding effects on transcription
Education
Ph.D. in Computational Biology, Ithaca, NY
Cornell University
2025
Dr. B. Franklin Pugh
B.A. in Interdisciplinary Computation - Biology
Colby College, Waterville, ME
2015
Minors in Math and Chinese
